chore(): Reorganize modules (#7210)

**What**
Move all modules to the modules directory

packages/modules/link-modules/src/repositories/index.ts

@@ -0,0 +1,2 @@
+export { MikroOrmBaseRepository as BaseRepository } from "@medusajs/utils"
+export { getLinkRepository } from "./link"

packages/modules/link-modules/src/repositories/link.ts

@@ -0,0 +1,49 @@
+import { Context, ModuleJoinerConfig } from "@medusajs/types"
+import { EntitySchema } from "@mikro-orm/core"
+
+import {
+  generateEntityId,
+  mikroOrmBaseRepositoryFactory,
+} from "@medusajs/utils"
+import { SqlEntityManager } from "@mikro-orm/postgresql"
+
+export function getLinkRepository(model: EntitySchema) {
+  return class LinkRepository extends mikroOrmBaseRepositoryFactory(model) {
+    readonly joinerConfig_: ModuleJoinerConfig
+
+    constructor({ joinerConfig }: { joinerConfig: ModuleJoinerConfig }) {
+      // @ts-ignore
+      super(...arguments)
+      this.joinerConfig_ = joinerConfig
+    }
+
+    async delete(data: any, context: Context = {}): Promise<void> {
+      const filter = {}
+      for (const key in data) {
+        filter[key] = {
+          $in: Array.isArray(data[key]) ? data[key] : [data[key]],
+        }
+      }
+
+      const manager = this.getActiveManager<SqlEntityManager>(context)
+      await manager.nativeDelete(model, data, {})
+    }
+
+    async create(data: object[], context: Context = {}): Promise<object[]> {
+      const manager = this.getActiveManager<SqlEntityManager>(context)
+
+      const links = data.map((link: any) => {
+        link.id = generateEntityId(
+          link.id,
+          this.joinerConfig_.databaseConfig?.idPrefix ?? "link"
+        )
+        link.deleted_at = null
+        return manager.create(model, link)
+      })
+
+      await manager.upsertMany(model, links)
+
+      return links
+    }
+  }
+}